Toshio Kojima

Genome Informatics 14: 408--409 (2003) Detection of Tissue Specific Genes by Putative (2004)

Katsuhiko Murakami, Toshio Kojima, Yoshiyuki Sakaki

Introduction Gene expression of multi-cellular organisms is regulated by transcription factors (TFs) that interact with regulatory cis-elements on DNA sequences. To find the functional regulatory...

Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression (2004)

Murakami, Katsuhiko, Kojima, Toshio, Sakaki, Yoshiyuki

Abstract Background Gene expression is regulated mainly by transcription factors (TFs) that interact with regulatory cis -elements on DNA sequences. To identify functional regulatory elements,...

Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression

Murakami, Katsuhiko, Kojima, Toshio, Sakaki, Yoshiyuki

Contribution of Asian mouse subspecies Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence–SNP analysis

Abe, Kuniya, Noguchi, Hideki, Tagawa, Keiko, Yuzuriha, Misako, Toyoda, Atsushi, Kojima, Toshio, ...

MSM/Ms is an inbred strain derived from the Japanese wild mouse, Mus musculus molossinus. It is believed that subspecies molossinus has contributed substantially to the genome constitution of common...

Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression

Murakami, Katsuhiko, Kojima, Toshio, Sakaki, Yoshiyuki

Contribution of Asian mouse subspecies Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence–SNP analysis

Abe, Kuniya, Noguchi, Hideki, Tagawa, Keiko, Yuzuriha, Misako, Toyoda, Atsushi, Kojima, Toshio, ...

MSM/Ms is an inbred strain derived from the Japanese wild mouse, Mus musculus molossinus. It is believed that subspecies molossinus has contributed substantially to the genome constitution of common...

NF-Y and Sp1/Sp3 are involved in the transcriptional regulation of the peptidylarginine deiminase type III gene (PADI3) in human keratinocytes

Dong, Sijun, Kanno, Takuya, Yamaki, Ayako, Kojima, Toshio, Shiraiwa, Masakazu, Kawada, Akira, ...

Human peptidylarginine deiminase type III gene (PADI3) encodes a crucial post-translational modification enzyme that converts protein-bound arginine residues into citrulline residues. Its expression...

Integrative Genome-Wide Expression Analysis Bears Evidence of Estrogen Receptor-Independent Transcription in Heregulin-Stimulated MCF-7 Cells

Nagashima, Takeshi, Suzuki, Takahiro, Kondo, Shinji, Kuroki, Yoko, Takahashi, Kaoru, Ide, Kaori, ...

Heregulin ß-1 (HRG) is an extracellular ligand that activates mitogen-activated protein kinase (MAPK) and phosphatidylinositol-3-OH kinase (PI3K)/Akt signaling pathways through ErbB receptors. MAPK...