Thomas Zeng

Publication List Details

Period

2006 - 2007

Number

10

Co-Authors

LongSAGE profiling of nine human embryonic stem cell lines (2007)

Hirst, Martin, Delaney, Allen, Rogers, Sean A, Schnerch, Angelique, Persaud, Deryck R, O'Connor, Michael D, ...

Abstract To facilitate discovery of novel human embryonic stem cell (ESC) transcripts, we generated 2.5 million LongSAGE tags from 9 human ESC lines. Analysis of this data revealed that ESCs express...

Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach (2006)

Bainbridge, Matthew N, Warren, René L, Hirst, Martin, Romanuik, Tammy, Zeng, Thomas, Go, Anne, ...

Abstract Background High throughput sequencing-by-synthesis is an emerging technology that allows the rapid production of millions of bases of data. Although the sequence reads are short, they can...

Systematic Recovery and Analysis of Full-ORF Human cDNA Clones

Baross, Ágnes, Butterfield, Yaron S.N., Coughlin, Shaun M., Zeng, Thomas, Griffith, Malachi, Griffith, Obi L., ...

The Mammalian Gene Collection (MGC) consortium (http://mgc.nci.nih.gov) seeks to establish publicly available collections of full-ORF cDNAs for several organisms of significance to biomedical...

Systematic Recovery and Analysis of Full-ORF Human cDNA Clones

Baross, Ágnes, Butterfield, Yaron S.N., Coughlin, Shaun M., Zeng, Thomas, Griffith, Malachi, Griffith, Obi L., ...

The Mammalian Gene Collection (MGC) consortium (http://mgc.nci.nih.gov) seeks to establish publicly available collections of full-ORF cDNAs for several organisms of significance to biomedical...

LongSAGE profiling of nine human embryonic stem cell lines

Hirst, Martin, Delaney, Allen, Rogers, Sean A, Schnerch, Angelique, Persaud, Deryck R, O'Connor, Michael D, ...

Analysis of a 2.6 million longSAGE sequence tag resource generated from nine human embryonic stem cell lines reveals an enrichment of RNA binding proteins and novel ES-specific transcripts.

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

Wederell, Elizabeth D., Bilenky, Mikhail, Cullum, Rebecca, Thiessen, Nina, Dagpinar, Melis, Delaney, Allen, ...

Foxa2 (HNF3β) is a one of three, closely related transcription factors that are critical to the development and function of the mouse liver. We have used chromatin immunoprecipitation and massively...

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

Morin, Ryan D., O’Connor, Michael D., Griffith, Malachi, Kuchenbauer, Florian, Delaney, Allen, Prabhu, Anna-Liisa, ...

MicroRNAs (miRNAs) are emerging as important, albeit poorly characterized, regulators of biological processes. Key to further elucidation of their roles is the generation of more complete lists of...