Mochida, Keiichi, Saisho, Daisuke, Yoshida, Takuhiro, Sakurai, Tetsuya, Shinozaki, Kazuo
Abstract Background The recent rapid accumulation of sequence resources of various crop species ensures an improvement in the genetics approach, including quantitative trait loci (QTL) analysis as...
Sakurai, Tetsuya, Plata, Germán, Rodríguez-Zapata, Fausto, Seki, Motoaki, Salcedo, Andrés, Toyoda, Atsushi, ...
Abstract Background Cassava, an allotetraploid known for its remarkable tolerance to abiotic stresses is an important source of energy for humans and animals and a raw material for many industrial...
Functional annotation of 19,841 Populus nigrafull-length enriched cDNA clones (2007)
Nanjo, Tokihiko, Sakurai, Tetsuya, Totoki, Yasushi, Toyoda, Atsushi, Nishiguchi, Mitsuru, Kado, Tomoyuki, ...
Abstract Background Populus is one of favorable model plants because of its small genome. Structural genomics of Populus has reached a breakpoint as nucleotides of the entire genome have been...
Yamamoto, Yoshiharu Y, Ichida, Hiroyuki, Matsui, Minami, Obokata, Junichi, Sakurai, Tetsuya, Satou, Masakazu, ...
Abstract Background Plant promoter architecture is important for understanding regulation and evolution of the promoters, but our current knowledge about plant promoter structure, especially with...
Itoh, Takeshi, Tanaka, Tsuyoshi, Barrero, Roberto A., Yamasaki, Chisato, Fujii, Yasuyuki, Hilton, Phillip B., ...
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and non-protein-coding RNA (npRNA) candidates...
A flexible representation of omic knowledge for thorough analysis of microarray data (2006)
Hasegawa, Yoshikazu, Seki, Motoaki, Mochizuki, Yoshiki, Heida, Naohiko, Hirosawa, Katsura, Okamoto, Naoki, ...
Abstract Background In order to understand microarray data reasonably in the context of other existing biological knowledge, it is necessary to conduct a thorough examination of the data utilizing...
Identification of Arabidopsis Genes Regulated by High Light–Stress Using cDNA Microarray¶ (2003)
Mitsuhiro Kimura, Yoshiharu Y. Yamamoto, Motoaki Seki, Tetsuya Sakurai, Masakazu Sato, Tomoko Abe, ...
In plants, excess light has the potential to damage the photosynthetic apparatus. The damage is caused in part by reactive oxygen species (ROS) generated by electrons leaking from the photosynthetic...
Mathematical Notation Understanding Methodology (1996)
Zhao, Yanjie, Sakurai, Tetsuya, Sugiura, Hiroshi, Torii, Tatsuo
Ito, Takuya, Motohashi, Reiko, Kuromori, Takashi, Mizukado, Saho, Sakurai, Tetsuya, Kanahara, Hiroko, ...
We transposed Dissociation (Ds) elements from three start loci on chromosome 5 in Arabidopsis (Nossen ecotype) by using a local transposition system. We determined partial genomic sequences flanking...
Taji, Teruaki, Seki, Motoaki, Satou, Masakazu, Sakurai, Tetsuya, Kobayashi, Masatomo, Ishiyama, Kanako, ...
Salt cress (Thellungiella halophila), a halophyte, is a genetic model system with a small plant size, short life cycle, copious seed production, small genome size, and an efficient transformation....
Iida, Kei, Seki, Motoaki, Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Toyoda, Tetsuro, ...
We mapped RIKEN Arabidopsis full-length (RAFL) cDNAs to the Arabidopsis thaliana genome to search for alternative splicing events. We used 278 734 full-length and 3′/5′ terminal reads of the...
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Iida, Kei, Seki, Motoaki, Kuromori, Takashi, ...
The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL)...
A flexible representation of omic knowledge for thorough analysis of microarray data
Hasegawa, Yoshikazu, Seki, Motoaki, Mochizuki, Yoshiki, Heida, Naohiko, Hirosawa, Katsura, Okamoto, Naoki, ...
Ito, Takuya, Motohashi, Reiko, Kuromori, Takashi, Mizukado, Saho, Sakurai, Tetsuya, Kanahara, Hiroko, ...
We transposed Dissociation (Ds) elements from three start loci on chromosome 5 in Arabidopsis (Nossen ecotype) by using a local transposition system. We determined partial genomic sequences flanking...
Taji, Teruaki, Seki, Motoaki, Satou, Masakazu, Sakurai, Tetsuya, Kobayashi, Masatomo, Ishiyama, Kanako, ...
Salt cress (Thellungiella halophila), a halophyte, is a genetic model system with a small plant size, short life cycle, copious seed production, small genome size, and an efficient transformation....
Iida, Kei, Seki, Motoaki, Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Toyoda, Tetsuro, ...
We mapped RIKEN Arabidopsis full-length (RAFL) cDNAs to the Arabidopsis thaliana genome to search for alternative splicing events. We used 278 734 full-length and 3′/5′ terminal reads of the...
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Iida, Kei, Seki, Motoaki, Kuromori, Takashi, ...
The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL)...
A flexible representation of omic knowledge for thorough analysis of microarray data
Hasegawa, Yoshikazu, Seki, Motoaki, Mochizuki, Yoshiki, Heida, Naohiko, Hirosawa, Katsura, Okamoto, Naoki, ...
Identification of plant promoter constituents by analysis of local distribution of short sequences
Yamamoto, Yoshiharu Y, Ichida, Hiroyuki, Matsui, Minami, Obokata, Junichi, Sakurai, Tetsuya, Satou, Masakazu, ...
Itoh, Takeshi, Tanaka, Tsuyoshi, Barrero, Roberto A., Yamasaki, Chisato, Fujii, Yasuyuki, Hilton, Phillip B., ...
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and non-protein-coding RNA (npRNA) candidates...
Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones
Nanjo, Tokihiko, Sakurai, Tetsuya, Totoki, Yasushi, Toyoda, Atsushi, Nishiguchi, Mitsuru, Kado, Tomoyuki, ...