Buess, Martin, Nuyten, Dimitry SA, Hastie, Trevor, Nielsen, Torsten, Pesich, Robert, Brown, Patrick O
Abstract Background Perturbations in cell-cell interactions are a key feature of cancer. However, little is known about the systematic effects of cell-cell interaction on global gene expression in...
Universal Reference RNA as a standard for microarray experiments (2004)
Novoradovskaya, Natalia, Whitfield, Michael L, Basehore, Lee S, Novoradovsky, Alexey, Pesich, Robert, Usary, Jerry, ...
Abstract Background Obtaining reliable and reproducible two-color microarray gene expression data is critically important for understanding the biological significance of perturbations made on a...
Ranade, Koustubh, Hinds, David, Hsiung, Chao Agnes, Chuang, Lee-Ming, Chang, Mau-Song, Chen, Ying-Tsung, ...
Background: Our understanding of genes that predispose to essential hypertension is poor. Methods: A genome-wide scan for linkage at ~10 cM resolution was done on 1425 sibpairs of Chinese and...
Genetic variation in aldosterone synthase predicts plasma glucose levels
Ranade, Koustubh, Wu, Kwan Dun, Risch, Neil, Olivier, Michael, Pei, Dee, Hsiao, Chin-Fu, ...
The mineralocorticoid hormone, aldosterone, is known to play a role in sodium homeostasis. We serendipitously found, however, highly significant association between single-nucleotide polymorphisms in...
Repeated observation of breast tumor subtypes in independent gene expression data sets
Sørlie, Therese, Tibshirani, Robert, Parker, Joel, Hastie, Trevor, Marron, J. S., Nobel, Andrew, ...
Characteristic patterns of gene expression measured by DNA microarrays have been used to classify tumors into clinically relevant subgroups. In this study, we have refined the previously defined...
High-Throughput Genotyping with Single Nucleotide Polymorphisms
Ranade, Koustubh, Chang, Mau-Song, Ting, Chih-Tai, Pei, Dee, Hsiao, Chin-Fu, Olivier, Michael, ...
To make large-scale association studies a reality, automated high-throughput methods for genotyping with single-nucleotide polymorphisms (SNPs) are needed. We describe PCR conditions that permit the...
Universal Reference RNA as a standard for microarray experiments
Novoradovskaya, Natalia, Whitfield, Michael L, Basehore, Lee S, Novoradovsky, Alexey, Pesich, Robert, Usary, Jerry, ...
Genetic variation in aldosterone synthase predicts plasma glucose levels
Ranade, Koustubh, Wu, Kwan Dun, Risch, Neil, Olivier, Michael, Pei, Dee, Hsiao, Chin-Fu, ...
The mineralocorticoid hormone, aldosterone, is known to play a role in sodium homeostasis. We serendipitously found, however, highly significant association between single-nucleotide polymorphisms in...
Repeated observation of breast tumor subtypes in independent gene expression data sets
Sørlie, Therese, Tibshirani, Robert, Parker, Joel, Hastie, Trevor, Marron, J. S., Nobel, Andrew, ...
Characteristic patterns of gene expression measured by DNA microarrays have been used to classify tumors into clinically relevant subgroups. In this study, we have refined the previously defined...
High-Throughput Genotyping with Single Nucleotide Polymorphisms
Ranade, Koustubh, Chang, Mau-Song, Ting, Chih-Tai, Pei, Dee, Hsiao, Chin-Fu, Olivier, Michael, ...
To make large-scale association studies a reality, automated high-throughput methods for genotyping with single-nucleotide polymorphisms (SNPs) are needed. We describe PCR conditions that permit the...
Universal Reference RNA as a standard for microarray experiments
Novoradovskaya, Natalia, Whitfield, Michael L, Basehore, Lee S, Novoradovsky, Alexey, Pesich, Robert, Usary, Jerry, ...
Buess, Martin, Nuyten, Dimitry SA, Hastie, Trevor, Nielsen, Torsten, Pesich, Robert, Brown, Patrick O
In an effort to deconvolute global gene-expression profiles, an interaction between some breast cancer cells and stromal fibroblasts was found to induce an interferon response, which may be...