Paul M. K. Gordon

A Pilot Study into the Usability of a Scientific Workflow Construction Tool (2007)

Gordon, Paul M. K., Sensen, Christoph W.

We describe a recent pilot study into the usability of the scientific workflow creation and enactment tool called Taverna. Both programmers and non-programmers were used as subjects for a defined...

A Pilot Study into the Usability of a Scientific Workflow Construction Tool (2007)

Gordon, Paul M. K., Sensen, Christoph W.

We describe a recent pilot study into the usability of the scientific workflow creation and enactment tool called Taverna. Both programmers and non-programmers were used as subjects for a defined...

Maintenance of ancestral complexity and non-metazoan genes in two basal cnidarians (2005)

Technau, Ulrich, Rudd, Stephen, Maxwell, Peter, Gordon, Paul M.K., Saina, Michael, Grasso, Lauretta C., ...

Cnidarians are among the simplest extant animals; however EST analyses reveal that they have a remarkably high level of genetic complexity. In this article, we show that the full diversity of...

Maintenance of ancestral complexity and non-metazoan genes in two basal cnidarians (2005)

Technau, Ulrich, Rudd, Stephen, Maxwell, Peter, Gordon, Paul M.K., Saina, Michael, Grasso, Lauretta C., ...

Cnidarians are among the simplest extant animals; however EST analyses reveal that they have a remarkably high level of genetic complexity. In this article, we show that the full diversity of...

Maintenance of ancestral complexity and non-metazoan genes in two basal cnidarians (2005)

Technau, Ulrich, Rudd, Stephen, Maxwell, Peter, Gordon, Paul M. K., Saina, Michael, Grasso, Lauretta C., ...

Cnidarians are among the simplest extant animals; however EST analyses reveal that they have a remarkably high level of genetic complexity. In this article, we show that the full diversity of...

Maintenance of ancestral complexity and non-metazoan genes in two basal cnidarians (2005)

Technau, Ulrich, Rudd, Stephen, Maxwell, Peter, Gordon, Paul M. K., Saina, Michael, Grasso, Lauretta C., ...

Cnidarians are among the simplest extant animals; however EST analyses reveal that they have a remarkably high level of genetic complexity. In this article, we show that the full diversity of...

The complete genome of the crenarchaeon Sulfolobus solfataricus P2

She, Qunxin, Singh, Rama K., Confalonieri, Fabrice, Zivanovic, Yvan, Allard, Ghislaine, Awayez, Mariana J., ...

The genome of the crenarchaeon Sulfolobus solfataricus P2 contains 2,992,245 bp on a single chromosome and encodes 2,977 proteins and many RNAs. One-third of the encoded proteins have no detectable...

Osprey: a comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays

Gordon, Paul M. K., Sensen, Christoph W.

We have developed a software package called Osprey for the calculation of optimal oligonucleotides for DNA sequencing and the creation of microarrays based on either PCR-products or directly spotted...

The complete genome of the crenarchaeon Sulfolobus solfataricus P2

She, Qunxin, Singh, Rama K., Confalonieri, Fabrice, Zivanovic, Yvan, Allard, Ghislaine, Awayez, Mariana J., ...

The genome of the crenarchaeon Sulfolobus solfataricus P2 contains 2,992,245 bp on a single chromosome and encodes 2,977 proteins and many RNAs. One-third of the encoded proteins have no detectable...

Osprey: a comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays

Gordon, Paul M. K., Sensen, Christoph W.

We have developed a software package called Osprey for the calculation of optimal oligonucleotides for DNA sequencing and the creation of microarrays based on either PCR-products or directly spotted...

Reconstructing the Mosaic Glycolytic Pathway of the Anaerobic Eukaryote Monocercomonoides▿ †

Liapounova, Natalia A., Hampl, Vladimir, Gordon, Paul M. K., Sensen, Christoph W., Gedamu, Lashitew, Dacks, Joel B.

All eukaryotes carry out glycolysis, interestingly, not all using the same enzymes. Anaerobic eukaryotes face the challenge of fewer molecules of ATP extracted per molecule of glucose due to their...

Response of the Hyperthermophilic Archaeon Sulfolobus solfataricus to UV Damage▿ †

Fröls, Sabrina, Gordon, Paul M. K., Panlilio, Mayi Arcellana, Duggin, Iain G., Bell, Stephen D., Sensen, Christoph W., ...

In order to characterize the genome-wide transcriptional response of the hyperthermophilic, aerobic crenarchaeote Sulfolobus solfataricus to UV damage, we used high-density DNA microarrays which...