Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes (2006)
Mark Yandell, Chris J. Mungall, Chris Smith, Simon Prochnik, Joshua Kaminker, George Hartzell, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
The Sequence Ontology: a tool for the unification of genome annotations (2005)
Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, ...
Abstract The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange,...
Kerlavage, Anthony, Bonazzi, Vivien, Di Tommaso, Matteo, Lawrence, Charles, Li, Peter, Mayberry, Frank, ...
The Celera Discovery System™ (CDS) is a web-accessible research workbench for mining genomic and related biological information. Users have access to the human and mouse genome sequences with...
Yandell, Mark, Bailey, Adina M., Misra, Sima, Shu, ShengQiang, Wiel, Colin, Evans-Holm, Martha, ...
Five years after the completion of the sequence of the Drosophila melanogaster genome, the number of protein-coding genes it contains remains a matter of debate; the number of computational gene...
The Sequence Ontology: a tool for the unification of genome annotations
Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, ...
The goal of the Sequence Ontology (SO) project is to produce a structured controlled vocabulary with a common set of terms and definitions for parts of a genomic annotation, and to describe the...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
Kerlavage, Anthony, Bonazzi, Vivien, Di Tommaso, Matteo, Lawrence, Charles, Li, Peter, Mayberry, Frank, ...
The Celera Discovery System™ (CDS) is a web-accessible research workbench for mining genomic and related biological information. Users have access to the human and mouse genome sequences with...
Yandell, Mark, Bailey, Adina M., Misra, Sima, Shu, ShengQiang, Wiel, Colin, Evans-Holm, Martha, ...
Five years after the completion of the sequence of the Drosophila melanogaster genome, the number of protein-coding genes it contains remains a matter of debate; the number of computational gene...
The Sequence Ontology: a tool for the unification of genome annotations
Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, ...
The goal of the Sequence Ontology (SO) project is to produce a structured controlled vocabulary with a common set of terms and definitions for parts of a genomic annotation, and to describe the...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
Cantarel, Brandi L., Korf, Ian, Robb, Sofia M.C., Parra, Genis, Ross, Eric, Moore, Barry, ...
We have developed a portable and easily configurable genome annotation pipeline called MAKER. Its purpose is to allow investigators to independently annotate eukaryotic genomes and create genome...
Yandell, Mark, Moore, Barry, Salas, Fidel, Mungall, Chris, MacBride, Andrew, White, Charles, ...
The millions of mutations and polymorphisms that occur in human populations are potential predictors of disease, of our reactions to drugs, of predisposition to microbial infections, and of...