John I. Murray

AceTree: a tool for visual analysis of Caenorhabditis elegansembryogenesis (2006)

Boyle, Thomas J, Bao, Zhirong, Murray, John I, Araya, Carlos L, Waterston, Robert H

Abstract Background The invariant lineage of the nematode Caenorhabditis elegans has potential as a powerful tool for the description of mutant phenotypes and gene expression patterns. We previously...

Identification of Genes Periodically Expressed in the Human Cell Cycle and Their Expression in TumorsD⃞

Whitfield, Michael L., Sherlock, Gavin, Saldanha, Alok J., Murray, John I., Ball, Catherine A., Alexander, Karen E., ...

The genome-wide program of gene expression during the cell division cycle in a human cancer cell line (HeLa) was characterized using cDNA microarrays. Transcripts of >850 genes showed periodic...

The Role of Heat Shock Transcription Factor 1 in the Genome-wide Regulation of the Mammalian Heat Shock ResponseD⃞

Trinklein, Nathan D., Murray, John I., Hartman, Sara J., Botstein, David, Myers, Richard M.

Previous work has implicated heat shock transcription factor 1 (HSF1) as the primary transcription factor responsible for the transcriptional response to heat stress in mammalian cells. We...

Automated cell lineage tracing in Caenorhabditis elegans

Bao, Zhirong, Murray, John I., Boyle, Thomas, Ooi, Siew Loon, Sandel, Matthew J., Waterston, Robert H.

The invariant cell lineage and cell fate of Caenorhabditis elegans provide a unique opportunity to decode the molecular mechanisms of animal development. To exploit this opportunity, we have...

Identification of Genes Periodically Expressed in the Human Cell Cycle and Their Expression in TumorsD⃞

Whitfield, Michael L., Sherlock, Gavin, Saldanha, Alok J., Murray, John I., Ball, Catherine A., Alexander, Karen E., ...

The genome-wide program of gene expression during the cell division cycle in a human cancer cell line (HeLa) was characterized using cDNA microarrays. Transcripts of >850 genes showed periodic...

The Role of Heat Shock Transcription Factor 1 in the Genome-wide Regulation of the Mammalian Heat Shock ResponseD⃞

Trinklein, Nathan D., Murray, John I., Hartman, Sara J., Botstein, David, Myers, Richard M.

Previous work has implicated heat shock transcription factor 1 (HSF1) as the primary transcription factor responsible for the transcriptional response to heat stress in mammalian cells. We...

Automated cell lineage tracing in Caenorhabditis elegans

Bao, Zhirong, Murray, John I., Boyle, Thomas, Ooi, Siew Loon, Sandel, Matthew J., Waterston, Robert H.

The invariant cell lineage and cell fate of Caenorhabditis elegans provide a unique opportunity to decode the molecular mechanisms of animal development. To exploit this opportunity, we have...