Janos Demeter

Intrinsic androgen-dependent gene expression patterns revealed by comparison of genital fibroblasts from normal males and individuals with complete and partial androgen insensitivity syndrome (2007)

Holterhus, Paul-Martin, Deppe, Uta, Werner, Ralf, Richter-Unruh, Annette, Bebermeier, Jan-Hendrik, Wünsch, Lutz, ...

Abstract Background To better understand the molecular programs of normal and abnormal genital development, clear-cut definition of androgen-dependent gene expression patterns, without the influence...

GeneXplorer: an interactive web application for microarray data visualization and analysis (2004)

Rees, Christian A, Demeter, Janos, Matese, John C, Botstein, David, Sherlock, Gavin

Abstract Background When publishing large-scale microarray datasets, it is of great value to create supplemental websites where either the full data, or selected subsets corresponding to figures...

Differential gene-expression patterns in genital fibroblasts of normal males and 46,XY females with androgen insensitivity syndrome: evidence for early programming involving the androgen receptor (2003)

Holterhus, Paul-Martin, Hiort, Olaf, Demeter, Janos, Brown, Patrick O, Brooks, James D

Abstract Background Androgen insensitivity syndrome (AIS) comprises a range of phenotypes from male infertility to complete feminization. Most individuals with AIS carry germline mutations of the...

The Ran GTPase System in Fission Yeast Affects Microtubules and Cytokinesis in Cells That Are Competent for Nucleocytoplasmic Protein Transport

Salus, Sandra S., Demeter, Janos, Sazer, Shelley

Misregulation of the evolutionarily conserved GTPase Ran in fission yeast results in defects in several cellular processes in cells that are competent for nucleocytoplasmic protein transport. These...

The Stanford Microarray Database: data access and quality assessment tools

Gollub, Jeremy, Ball, Catherine A., Binkley, Gail, Demeter, Janos, Finkelstein, David B., Hebert, Joan M., ...

The Stanford Microarray Database (SMD; http://genome-www.stanford.edu/microarray/) serves as a microarray research database for Stanford investigators and their collaborators. In addition, SMD...

Repeated observation of breast tumor subtypes in independent gene expression data sets

Sørlie, Therese, Tibshirani, Robert, Parker, Joel, Hastie, Trevor, Marron, J. S., Nobel, Andrew, ...

Characteristic patterns of gene expression measured by DNA microarrays have been used to classify tumors into clinically relevant subgroups. In this study, we have refined the previously defined...

Differential gene-expression patterns in genital fibroblasts of normal males and 46,XY females with androgen insensitivity syndrome: evidence for early programming involving the androgen receptor

Holterhus, Paul-Martin, Hiort, Olaf, Demeter, Janos, Brown, Patrick O, Brooks, James D

Most individuals with androgen insensitivity syndrome (AIS) carry germline mutations of the androgen receptor (AR) that interfere with or ablate its function. As genital fibroblasts retain expression...

Transcriptional Remodeling in Response to Iron Deprivation in Saccharomyces cerevisiaeD⃞

Shakoury-Elizeh, Minoo, Tiedeman, John, Rashford, Jared, Ferea, Tracey, Demeter, Janos, Garcia, Emily, ...

The budding yeast Saccharomyces cerevisiae responds to depletion of iron in the environment by activating Aft1p, the major iron-dependent transcription factor, and by transcribing systems involved in...

The Stanford Microarray Database accommodates additional microarray platforms and data formats

Ball, Catherine A., Awad, Ihab A. B., Demeter, Janos, Gollub, Jeremy, Hebert, Joan M., Hernandez-Boussard, Tina, ...

The Stanford Microarray Database (SMD) (http://smd.stanford.edu) is a research tool for hundreds of Stanford researchers and their collaborators. In addition, SMD functions as a resource for the...

Comparative Genomic Hybridizations of Entamoeba Strains Reveal Unique Genetic Fingerprints That Correlate with Virulence

Shah, Preetam H., MacFarlane, Ryan C., Bhattacharya, Dhruva, Matese, John C., Demeter, Janos, Stroup, Suzanne E., ...

Variable phenotypes have been identified for Entamoeba species. Entamoeba histolytica is invasive and causes colitis and liver abscesses but only in ∼10% of infected individuals; 90% remain...

The Ran GTPase System in Fission Yeast Affects Microtubules and Cytokinesis in Cells That Are Competent for Nucleocytoplasmic Protein Transport

Salus, Sandra S., Demeter, Janos, Sazer, Shelley

Misregulation of the evolutionarily conserved GTPase Ran in fission yeast results in defects in several cellular processes in cells that are competent for nucleocytoplasmic protein transport. These...

The Stanford Microarray Database: data access and quality assessment tools

Gollub, Jeremy, Ball, Catherine A., Binkley, Gail, Demeter, Janos, Finkelstein, David B., Hebert, Joan M., ...

The Stanford Microarray Database (SMD; http://genome-www.stanford.edu/microarray/) serves as a microarray research database for Stanford investigators and their collaborators. In addition, SMD...

Repeated observation of breast tumor subtypes in independent gene expression data sets

Sørlie, Therese, Tibshirani, Robert, Parker, Joel, Hastie, Trevor, Marron, J. S., Nobel, Andrew, ...

Characteristic patterns of gene expression measured by DNA microarrays have been used to classify tumors into clinically relevant subgroups. In this study, we have refined the previously defined...

Differential gene-expression patterns in genital fibroblasts of normal males and 46,XY females with androgen insensitivity syndrome: evidence for early programming involving the androgen receptor

Holterhus, Paul-Martin, Hiort, Olaf, Demeter, Janos, Brown, Patrick O, Brooks, James D

Most individuals with androgen insensitivity syndrome (AIS) carry germline mutations of the androgen receptor (AR) that interfere with or ablate its function. As genital fibroblasts retain expression...

Transcriptional Remodeling in Response to Iron Deprivation in Saccharomyces cerevisiaeD⃞

Shakoury-Elizeh, Minoo, Tiedeman, John, Rashford, Jared, Ferea, Tracey, Demeter, Janos, Garcia, Emily, ...

The budding yeast Saccharomyces cerevisiae responds to depletion of iron in the environment by activating Aft1p, the major iron-dependent transcription factor, and by transcribing systems involved in...

The Stanford Microarray Database accommodates additional microarray platforms and data formats

Ball, Catherine A., Awad, Ihab A. B., Demeter, Janos, Gollub, Jeremy, Hebert, Joan M., Hernandez-Boussard, Tina, ...

The Stanford Microarray Database (SMD) (http://smd.stanford.edu) is a research tool for hundreds of Stanford researchers and their collaborators. In addition, SMD functions as a resource for the...

Comparative Genomic Hybridizations of Entamoeba Strains Reveal Unique Genetic Fingerprints That Correlate with Virulence

Shah, Preetam H., MacFarlane, Ryan C., Bhattacharya, Dhruva, Matese, John C., Demeter, Janos, Stroup, Suzanne E., ...

Variable phenotypes have been identified for Entamoeba species. Entamoeba histolytica is invasive and causes colitis and liver abscesses but only in ∼10% of infected individuals; 90% remain...

The Stanford Microarray Database: implementation of new analysis tools and open source release of software

Demeter, Janos, Beauheim, Catherine, Gollub, Jeremy, Hernandez-Boussard, Tina, Jin, Heng, Maier, Donald, ...

The Stanford Microarray Database (SMD; ) is a research tool and archive that allows hundreds of researchers worldwide to store, annotate, analyze and share data generated by microarray technology....

imp2, a New Component of the Actin Ring in the Fission Yeast Schizosaccharomyces pombe

Demeter, Janos, Sazer, Shelley

Cytokinesis is the part of the cell cycle in which the cell is cleaved to form two daughter cells. The unicellular yeast, Schizosaccharomyces pombe is an excellent model organism in which to study...