Jacqueline Weber

Analysis of RNA Sequence Structure Maps by Exhaustive Enumeration (1996)

Walter Gr Uner, Robert Giegerich, Dirk Strohmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

The mapping from RNA sequences to their secondary structures is investigated by exhaustively folding all GC and AU sequences with chain lengths up to 30. We analyse the distribution of secondary...

Analysis of RNA Sequence-Structure Maps by Exhaustive Enumeration (1996)

Walter Gr Uner, Robert Giegerich, Dirk Strohmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

The mapping from RNA sequences to their secondary structures is investigated by exhaustively folding all GC and AU sequences with chain lengths up to 30. We analyse the distribution of secondary...

Analysis of RNA Sequence Structure Maps by Exhaustive Enumeration - II. Structures of Neutral Networks and Shape Space Covering (1995)

Walter Gr Uner, Robert Giegerich, Dirk Strothmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

The relations between RNA sequences and secondary structures are investigated by exhaustive folding of all GC and AU sequences with chain lengths up to 30. The technique of tries is used for economic...

Analysis of RNA Sequence Structure Maps by Exhaustive Enumeration - I. Neutral Networks (1995)

Walter Gr Uner, Robert Giegerich, Dirk Strothmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

Global relations between RNA sequences and secondary structures are understood as mappings from sequence space into shape space. These mappings are investigated by exhaustive folding of all GC and AU...

Analysis of RNA Sequence Structure Maps by Exhaustive Enumeration (1995)

Walter Gr Uner, Robert Giegerich, Dirk Strothmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

Global relations between RNA sequences and secondary structues are understood as mappings from sequence space into shape space. These mappings are investigated by exhaustive folding of all GC and AU...

Evolutionary Dynamics and Optimization: Neutral Networks as Model-Landscapes for RNA Secondary-Structure Folding-Landscapes (1995)

Forst, Christian V., Reidys, Christian, Weber, Jacqueline

We view the folding of RNA-sequences as a map that assigns a pattern of base pairings to each sequence, known as secondary structure. These preimages can be constructed as random graphs (i.e. the...

Analysis of the Heat Shock Response of Neisseria meningitidis with cDNA- and Oligonucleotide-Based DNA Microarrays

Guckenberger, Matthias, Kurz, Sebastian, Aepinus, Christian, Theiss, Stephanie, Haller, Sabine, Leimbach, Thomas, ...

Oligonucleotide- and cDNA-based microarrays comprising a subset of Neisseria meningitidis genes were assessed for study of the meningococcal heat shock response and found to be highly suitable for...

Transcriptome Analysis of Neisseria meningitidis during Infection

Dietrich, Guido, Kurz, Sebastian, Hübner, Claudia, Aepinus, Christian, Theiss, Stephanie, Guckenberger, Matthias, ...

Neisseria meningitidis is the cause of septicemia and meningococcal meningitis. During the course of infection, N. meningitidis encounters multiple environments within its host, which makes rapid...

The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus

Suerbaum, Sebastian, Josenhans, Christine, Sterzenbach, Torsten, Drescher, Bernd, Brandt, Petra, Bell, Monica, ...

Helicobacter hepaticus causes chronic hepatitis and liver cancer in mice. It is the prototype enterohepatic Helicobacter species and a close relative of Helicobacter pylori, also a recognized...

Large-Scale Sequencing of Two Regions in Human Chromosome 7q22: Analysis of 650 kb of Genomic Sequence around the EPO and CUTL1 Loci Reveals 17 Genes

Glöckner, Gernot, Scherer, Stephen, Schattevoy, Ruben, Boright, Andrew, Weber, Jacqueline, Tsui, Lap-Chee, ...

We have sequenced and annotated two genomic regions located in the Giemsa negative band q22 of human chromosome 7. The first region defined by the erythropoietin (EPO) locus is 228 kb in length and...

Identification of an N-Terminal Trimeric Coiled-Coil Core within Arenavirus Glycoprotein 2 Permits Assignment to Class I Viral Fusion Proteins

Eschli, Bruno, Quirin, Katharina, Wepf, Alexander, Weber, Jacqueline, Zinkernagel, Rolf, Hengartner, Hans

The lymphocytic choriomeningitis virus (LCMV) glycoprotein (GP) consists of the transmembrane subunit GP-2 and the receptor binding subunit GP-1. Both are synthesized as one precursor protein and...

Analysis of the Heat Shock Response of Neisseria meningitidis with cDNA- and Oligonucleotide-Based DNA Microarrays

Guckenberger, Matthias, Kurz, Sebastian, Aepinus, Christian, Theiss, Stephanie, Haller, Sabine, Leimbach, Thomas, ...

Oligonucleotide- and cDNA-based microarrays comprising a subset of Neisseria meningitidis genes were assessed for study of the meningococcal heat shock response and found to be highly suitable for...

Transcriptome Analysis of Neisseria meningitidis during Infection

Dietrich, Guido, Kurz, Sebastian, Hübner, Claudia, Aepinus, Christian, Theiss, Stephanie, Guckenberger, Matthias, ...

Neisseria meningitidis is the cause of septicemia and meningococcal meningitis. During the course of infection, N. meningitidis encounters multiple environments within its host, which makes rapid...

The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus

Suerbaum, Sebastian, Josenhans, Christine, Sterzenbach, Torsten, Drescher, Bernd, Brandt, Petra, Bell, Monica, ...

Helicobacter hepaticus causes chronic hepatitis and liver cancer in mice. It is the prototype enterohepatic Helicobacter species and a close relative of Helicobacter pylori, also a recognized...

Large-Scale Sequencing of Two Regions in Human Chromosome 7q22: Analysis of 650 kb of Genomic Sequence around the EPO and CUTL1 Loci Reveals 17 Genes

Glöckner, Gernot, Scherer, Stephen, Schattevoy, Ruben, Boright, Andrew, Weber, Jacqueline, Tsui, Lap-Chee, ...

We have sequenced and annotated two genomic regions located in the Giemsa negative band q22 of human chromosome 7. The first region defined by the erythropoietin (EPO) locus is 228 kb in length and...

Identification of an N-Terminal Trimeric Coiled-Coil Core within Arenavirus Glycoprotein 2 Permits Assignment to Class I Viral Fusion Proteins

Eschli, Bruno, Quirin, Katharina, Wepf, Alexander, Weber, Jacqueline, Zinkernagel, Rolf, Hengartner, Hans

The lymphocytic choriomeningitis virus (LCMV) glycoprotein (GP) consists of the transmembrane subunit GP-2 and the receptor binding subunit GP-1. Both are synthesized as one precursor protein and...

Nonneutralizing antibodies binding to the surface glycoprotein of lymphocytic choriomeningitis virus reduce early virus spread

Hangartner, Lars, Zellweger, Raphaël M., Giobbi, Mattia, Weber, Jacqueline, Eschli, Bruno, McCoy, Kathy D., ...

The biological relevance of nonneutralizing antibodies elicited early after infection with noncytopathic persistence-prone viruses is unclear. We demonstrate that cytotoxic T lymphocyte–deficient...

A lymphocytic choriomeningitis virus glycoprotein variant that is retained in the endoplasmic reticulum efficiently cross-primes CD8+ T cell responses

Freigang, Stefan, Eschli, Bruno, Harris, Nicola, Geuking, Markus, Quirin, Katharina, Schrempf, Sabrina, ...

Recent studies indicate that T cell cross-priming preferentially occurs against long-lived, stable proteins. We have studied cross-priming by using the glycoprotein (GP) of lymphocytic...

Early Antibodies Specific for the Neutralizing Epitope on the Receptor Binding Subunit of the Lymphocytic Choriomeningitis Virus Glycoprotein Fail To Neutralize the Virus▿

Eschli, Bruno, Zellweger, Raphaël M., Wepf, Alexander, Lang, Karl S., Quirin, Katharina, Weber, Jacqueline, ...

Lymphocytic choriomeningitis virus (LCMV) is a murine arenavirus whose glycoprotein consists of a transmembrane subunit (GP-2) and a receptor-binding subunit (GP-1). LCMV-neutralizing antibodies...

Analysis of RNA Sequence Structure Maps by Exhaustive Enumeration

Walter Gruner, Robert Giegerich, Dirk Strothmann, Christian Reidys, Jacqueline Weber, Ivo L. Hofacker, ...

Global relations between RNA sequences and secondary structures are understood as mappings from sequence space into shape space. These mappings are investigated by exhaustive folding of all GC and AU...

Evolutionary Dynamics and Optimization

Christian V. Forst, Christian Reidys, Jacqueline Weber

We view the folding of RNA-sequences as a map that assigns a pattern of base pairings to each sequence, known as secondary structure. These preimages can be constructed as random graphs (i.e., the...