Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes (2006)
Mark Yandell, Chris J. Mungall, Chris Smith, Simon Prochnik, Joshua Kaminker, George Hartzell, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence
Florea, Liliana, Hartzell, George, Zhang, Zheng, Rubin, Gerald M., Miller, Webb
We address the problem of efficiently aligning a transcribed and spliced DNA sequence with a genomic sequence containing that gene, allowing for introns in the genomic sequence and a relatively small...
Genome Annotation Assessment in Drosophila melanogaster
Reese, Martin G., Hartzell, George, Harris, Nomi L., Ohler, Uwe, Abril, Josep F., Lewis, Suzanna E.
Computational methods for automated genome annotation are critical to our community's ability to make full use of the large volume of genomic sequence being generated and released. To explore the...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence
Florea, Liliana, Hartzell, George, Zhang, Zheng, Rubin, Gerald M., Miller, Webb
We address the problem of efficiently aligning a transcribed and spliced DNA sequence with a genomic sequence containing that gene, allowing for introns in the genomic sequence and a relatively small...
Genome Annotation Assessment in Drosophila melanogaster
Reese, Martin G., Hartzell, George, Harris, Nomi L., Ohler, Uwe, Abril, Josep F., Lewis, Suzanna E.
Computational methods for automated genome annotation are critical to our community's ability to make full use of the large volume of genomic sequence being generated and released. To explore the...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...