Ernest Szeto

Metagenomic analysis of phosphorus removing sludge communities (2008)

Garcia Martin, Hector, Ivanova, Natalia, Kunin, Victor, Warnecke, Falk, Barry, Kerrie, McHardy, Alice C., ...

Enhanced Biological Phosphorus Removal (EBPR) is not well understood at the metabolic level despite being one of the best-studied microbially-mediated industrial processes due to its ecological and...

Constructing and Maintaining Scientific Database Views in the Framework of the Object-Protocol Model (1997)

Anthony S. Kosky, Victor M. Markowitz, Ernest Szeto

Scientific databases (ScDBs) are used to archive and retrieve data describing objects of scientific inquiry. Since these ScDBs must provide continuous and efficient access to large communities of...

Facilities For Exploring Molecular Biology Databases On The Web: A Comparative Study (1996)

Victor M. Markowitz, Anthony S. Kosky, Ernest Szeto

this paper, we discuss criteria for evaluating the main facilities required for exploring MBDs on the Web, that is, retrieving and interpreting MBD metadata and data. We apply these criteria in...

The integrated microbial genomes (IMG) system

Markowitz, Victor M., Korzeniewski, Frank, Palaniappan, Krishna, Szeto, Ernest, Werner, Greg, Padki, Anu, ...

The integrated microbial genomes (IMG) system is a new data management and analysis platform for microbial genomes provided by the Joint Genome Institute (JGI). IMG contains both draft and complete...

The integrated microbial genomes (IMG) system

Markowitz, Victor M., Korzeniewski, Frank, Palaniappan, Krishna, Szeto, Ernest, Werner, Greg, Padki, Anu, ...

The integrated microbial genomes (IMG) system is a new data management and analysis platform for microbial genomes provided by the Joint Genome Institute (JGI). IMG contains both draft and complete...

Dissecting biological “dark matter” with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

Marcy, Yann, Ouverney, Cleber, Bik, Elisabeth M., Lösekann, Tina, Ivanova, Natalia, Martin, Hector Garcia, ...

We have developed a microfluidic device that allows the isolation and genome amplification of individual microbial cells, thereby enabling organism-level genomic analysis of complex microbial...

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

Markowitz, Victor M., Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Chu, Ken, Chen, I-Min A., ...

The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform for all publicly available genomes. IMG contains both draft and complete JGI microbial genomes...

IMG/M: a data management and analysis system for metagenomes

Markowitz, Victor M., Ivanova, Natalia N., Szeto, Ernest, Palaniappan, Krishna, Chu, Ken, Dalevi, Daniel, ...

IMG/M is a data management and analysis system for microbial community genomes (metagenomes) hosted at the Department of Energy's (DOE) Joint Genome Institute (JGI). IMG/M consists of metagenome data...