Chunlin Wang

On the Asymptotic Normality of the Conditional Maximum Likelihood Estimators for the Truncated Regression Model and the Tobit Model (2008)

Wang, Chunlin

In this paper, we study the asymptotic normality of the conditional maximum likelihood (ML) estimators for the truncated regression model and the Tobit model. We show that under the general setting...

Consistent dissection of the protein interaction network by combining global and local metrics (2007)

Wang, Chunlin, Ding, Chris, Yang, Qiaofeng, Holbrook, Stephen R

Abstract We propose a new network decomposition method to systematically identify protein interaction modules in the protein interaction network. Our method incorporates both a global metric and a...

Viral population estimation using pyrosequencing (2007)

Eriksson, Nicholas, Pachter, Lior, Mitsuya, Yumi, Rhee, Soo-Yon, Wang, Chunlin, Gharizadeh, Baback, ...

The diversity of virus populations within single infected hosts presents a major difficulty for the natural immune response as well as for vaccine design and antiviral drug therapy. Recently...

On the Estimates of the Density of Feynman-Kac Semigroups of $\alpha$-Stable-like Processes (2006)

Wang, Chunlin

Suppose that $\alpha \in (0,2)$ and that $X$ is an $\alpha$-stable-like process on $\R^d$. Let $F$ be a function on $\R^d$ belonging to the class $\bf{J_{d,\alpha}}$ (see Introduction) and...

On the Estimates of the Density of the Purely Discontinuous Girsanov Transforms of $\alpha$-Stable-like Processes (2006)

Wang, Chunlin

In this paper, we study the purely discontinuous Girsanov transforms which were discussed in Chen and Song \cite{CS2} and Song \cite{S3}. We show that the transition density of any purely...

Estimation of Parameters of Stable Distributions (2006)

Wang, Chunlin

In this paper, we propose a method based on GMM (the generalized method of moments) to estimate the parameters of stable distributions with $0

Genomic multiple sequence alignments: refinement using a genetic algorithm (2005)

Wang, Chunlin, Lefkowitz, Elliot J

Abstract Background Genomic sequence data cannot be fully appreciated in isolation. Comparative genomics – the practice of comparing genomic sequences from different species – plays an...

SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters (2004)

Wang, Chunlin, Lefkowitz, Elliot J

Abstract Background Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a useful source...

Cotton aphid predators on alfalfa and their impact on cotton aphid abundance (2004)

Runzhi Zhang, Li Ren, Chunlin Wang, Ronghua Lin, Changyan Tian

In 2000 and 2001, studies were carried out to evaluate the influence of predators on the cotton aphid, Aphis gossypii Glover (Homoptera: Aphididae), in Xinjiang Uygur Autonomous Region, China, where...

Characterization of mutation spectra with ultra-deep pyrosequencing: Application to HIV-1 drug resistance

Wang, Chunlin, Mitsuya, Yumi, Gharizadeh, Baback, Ronaghi, Mostafa, Shafer, Robert W.

The detection of mutant spectra within a population of microorganisms is critical for the management of drug-resistant infections. We performed ultra-deep pyrosequencing to detect minor sequence...

Consistent dissection of the protein interaction network by combining global and local metrics

Wang, Chunlin, Ding, Chris, Yang, Qiaofeng, Holbrook, Stephen R

A new network decomposition method is proposed that uses both a global metric and a local metric to identify protein interaction modules in the protein interaction network.

Viral Population Estimation Using Pyrosequencing

Eriksson, Nicholas, Pachter, Lior, Mitsuya, Yumi, Rhee, Soo-Yon, Wang, Chunlin, Gharizadeh, Baback, ...

The diversity of virus populations within single infected hosts presents a major difficulty for the natural immune response as well as for vaccine design and antiviral drug therapy. Recently...