Chen, Shu-Hwa, Lo, Chen-Zen, Tsai, Ming-Chi, Hsiung, Chao A, Lin, Chung-Yen
Abstract Background Nucleic acid hybridization, a fundamental technique in molecular biology, can be modified into very effective and sensitive methods for detecting particular targets mixed with...
Reconstruction of human protein interolog network using evolutionary conserved network (2007)
Huang, Tao-Wei, Lin, Chung-Yen, Kao, Cheng-Yan
Abstract Background The recent increase in the use of high-throughput two-hybrid analysis has generated large quantities of data on protein interactions. Specifically, the availability of information...
Lin, Chung-Yen, Chen, Shu-Hwa, Cho, Chi-Shiang, Chen, Chia-Ling, Lin, Fan-Kai, Lin, Chieh-Hua, ...
Abstract Background Proteins control and mediate many biological activities of cells by interacting with other protein partners. This work presents a statistical model to predict protein interaction...
A Bayes Regression Approach to Array-CGH Data (2006)
Wen, Chi-Chung, Wu, Yuh-Jenn, Huang, Yung-Hsiang, Chen, Wei-Chen, Liu, Shu-Chen, Jiang, Shih Sheng, ...
This paper develops a Bayes regression model having change points for the analysis of array-CGH data by utilizing not only the underlying spatial structure of the genomic alterations but also the...
A Bayes Regression Approach to Array-CGH Data (2006)
Wen, Chi-Chung, Wu, Yuh-Jenn, Huang, Yung-Hsiang, Chen, Wei-Chen, Liu, Shu-Chen, Jiang, Shih Sheng, ...
This paper develops a Bayes regression model having change points for the analysis of array-CGH data by utilizing not only the underlying spatial structure of the genomic alterations but also the...
A Bayes Regression Approach to Array-CGH Data (2006)
Wen, Chi-Chung, Wu, Yuh-Jenn, Huang, Yung-Hsiang, Chen, Wei-Chen, Liu, Shu-Chen, Jiang, Shih Sheng, ...
This paper develops a Bayes regression model having change points for the analysis of array-CGH data by utilizing not only the underlying spatial structure of the genomic alterations but also the...
A Bayes Regression Approach to Array-CGH Data (2006)
Wen, Chi-Chung, Wu, Yuh-Jenn, Huang, Yung-Hsiang, Chen, Wei-Chen, Liu, Shu-Chen, Jiang, Shih Sheng, ...
This paper develops a Bayes regression model having change points for the analysis of array-CGH data by utilizing not only the underlying spatial structure of the genomic alterations but also the...
Genome Informatics 14: 494--495 (2003) A Combined Experimental and Inferring Interactomes (2004)
Chung-yen Lin, Chi-shiang Cho, Li-ming Wang, Chia-ling Chen, Pao-yang Chen, Chen-zen Lo, ...
Introduction Most of the genetic programme that guides the body of an organism to perform all physiological processes throughout the whole lifespan is executed by proteins. The protein expressing...
Li, Ling-Hui, Li, Jian-Chiuan, Lin, Yung-Feng, Lin, Chung-Yen, Chen, Chung-Yung, Tsai, Shih-Feng
To facilitate transcript mapping and to investigate alterations in genomic structure and gene expression in a defined genomic target, we developed a novel microarray-based method to detect...
Lin, Chung-Yen, Lin, Fan-Kai, Lin, Chieh Hua, Lai, Li-Wei, Hsu, Hsiu-Jun, Chen, Shu-Hwa, ...
POWER, the PhylOgenetic WEb Repeater, is a web-based service designed to perform user-friendly pipeline phylogenetic analysis. POWER uses an open-source LAMP structure and infers genetic distances...
Li, Ling-Hui, Li, Jian-Chiuan, Lin, Yung-Feng, Lin, Chung-Yen, Chen, Chung-Yung, Tsai, Shih-Feng
To facilitate transcript mapping and to investigate alterations in genomic structure and gene expression in a defined genomic target, we developed a novel microarray-based method to detect...
Lin, Chung-Yen, Lin, Fan-Kai, Lin, Chieh Hua, Lai, Li-Wei, Hsu, Hsiu-Jun, Chen, Shu-Hwa, ...
POWER, the PhylOgenetic WEb Repeater, is a web-based service designed to perform user-friendly pipeline phylogenetic analysis. POWER uses an open-source LAMP structure and infers genetic distances...
Jiang, Shih Sheng, Chang, I-Shou, Huang, Lin-Wei, Chen, Po-Cheng, Wen, Chi-Chung, Liu, Shu-Chen, ...
Baculoviruses, a family of large, rod-shaped viruses that mainly infect lepidopteran insects, have been widely used to transduce various cells for exogenous gene expression. Nonetheless, how a virus...
Fly-DPI: database of protein interactomes for D. melanogaster in the approach of systems biology
Lin, Chung-Yen, Chen, Shu-Hwa, Cho, Chi-Shiang, Chen, Chia-Ling, Lin, Fan-Kai, Lin, Chieh-Hua, ...
The unique probe selector: a comprehensive web service for probe design and oligonucleotide arrays
Chen, Shu-Hwa, Lo, Chen-Zen, Tsai, Ming-Chi, Hsiung, Chao A, Lin, Chung-Yen
A Bayes Regression Approach to Array-CGH Data
Chi-Chung Wen, Yuh-Jenn Wu, Yung-Hsiang Huang, Wei-Chen Chen, Shu-Chen Liu, Shih Sheng Jiang, ...
This paper develops a Bayes regression model having change points for the analysis of array-CGH data by utilizing not only the underlying spatial structure of the genomic alterations but also the...
Hubba: hub objects analyzer—a framework of interactome hubs identification for network biology
Lin, Chung-Yen, Chin, Chia-Hao, Wu, Hsin-Hung, Chen, Shu-Hwa, Ho, Chin-Wen, Ko, Ming-Tat
One major task in the post-genome era is to reconstruct proteomic and genomic interacting networks using high-throughput experiment data. To identify essential nodes/hubs in these interactomes is a...