Christos Ouzounis

Automatic Extraction of Protein Interactions from Scientific Abstracts (2001)

James Thomas, David Milward, Christos Ouzounis, Stephen Pulman

This paper motivates the use of Information Extraction (IE) for gathering data on protein interactions, describes the customisation of an existing IE system, SRI's Highlight, for this task and...

HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae (2000)

Peter D. Karp, Christos Ouzounis, Suzanne Paley

1 We present a methodology for predicting the metabolic pathways of an organism from its genomic sequence by reference to a knowledge base of known metabolic pathways. We applied these techniques to...

Automatic Extraction of Protein Interactions from Scientific Abstracts (2000)

James Thomas, David Milward, Christos Ouzounis, Stephen Pulman

s James Thomas y , David Milward # , Christos Ouzounis , Stephen Pulman #y and Mark Carroll # SRI International, 23 Millers Yard, Mill Lane, Cambridge, CB2 1SD (http://www.cam.sri.com) y University...

Automatic Extraction of Protein Interactions from Scientific Abstracts (1999)

James Thomas, David Milward, Christos Ouzounis, Stephen Pulman

This paper motivates the use of Information Extraction #IE# for gathering data on

Automatic Extraction of Biological Information From Scientific Text: Protein-Protein Interactions (1999)

Christian Blaschke, Miguel A. Andrade, Christos Ouzounis

We describe the basic design of a system for automatic detection of protein--protein interactions extracted from scientific abstracts. By restricting the problem domain and imposing a number of...

Genequiz II: Automatic Function Assignment For Genome Sequence Analysis (1995)

Georg Casari, Christos Ouzounis, Alfonso Valencia, Chris Sander

n integrated system for large-scale biological sequence analysis. The main improvement of the system consists of a module that allows a fully automatic evaluation of results and function assignment....

Genequiz II: Automatic Function Assignment For Genome Sequence Analysis (1995)

Georg Casari, Christos Ouzounis, Alfonso Valencia, Chris Sander

GeneQuiz II, the updated version of an integrated system for large-scale biological sequence analysis. The main improvement of the system consists of a module that allows a fully automatic evaluation...

Computational disease gene identification: a concert of methods prioritizes type 2 diabetes and obesity candidate genes

Tiffin, Nicki, Adie, Euan, Turner, Frances, Brunner, Han G., Van Driel, Marc A., Oti, Martin, ...

Genome-wide experimental methods to identify disease genes, such as linkage analysis and association studies, generate increasingly large candidate gene sets for which comprehensive empirical...

Computational disease gene identification: a concert of methods prioritizes type 2 diabetes and obesity candidate genes

Tiffin, Nicki, Adie, Euan, Turner, Frances, Brunner, Han G., Van Driel, Marc A., Oti, Martin, ...

Genome-wide experimental methods to identify disease genes, such as linkage analysis and association studies, generate increasingly large candidate gene sets for which comprehensive empirical...