Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes (2006)
Mark Yandell, Chris J. Mungall, Chris Smith, Simon Prochnik, Joshua Kaminker, George Hartzell, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
Rubin, Daniel L., Lewis, Suzanna E., Mungall, Chris J., Misra, Sima, Westerfield, Monte, Ashburner, Michael, ...
The National Center for Biomedical Ontology (http://bioontology.org) is a consortium that comprises leading informaticians, biologists, clinicians, and ontologists funded by the NIH Roadmap to...
Barret D Pfeiffer, Roger A, Hoskins* Andreas Gnirke, Chris J Mungall, Adrienne M Wang, ...
Background: It is widely accepted that comparative sequence data can aid the functional annotation of genome sequences; however, the most informative species and features of genome evolution for...
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly (2002)
Hoskins, Roger A, Smith, Christopher D, Carlson, Joseph W, Carvalho, A Bernardo, Halpern, Aaron, Kaminker, Joshua S, ...
Abstract Background Most eukaryotic genomes include a substantial repeat-rich fraction termed heterochromatin, which is concentrated in centric and telomeric regions. The repetitive nature of...
Bergman, Casey M, Pfeiffer, Barret D, Rincón-Limas, Diego E, Hoskins, Roger A, Gnirke, Andreas, Mungall, Chris J, ...
Abstract Background It is widely accepted that comparative sequence data can aid the functional annotation of genome sequences; however, the most informative species and features of genome evolution...
The Bioperl Toolkly Perl Modules (2002)
Steven E. Brenner, Stephen A. Chervitz, Chris Dagdigian, Georg Fuellen, Ian Korf, ...
Data Type by defining how a given modul wil behave without specifying the mechanism by which it achieves this end.
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly
Hoskins, Roger A, Smith, Christopher D, Carlson, Joseph W, Carvalho, A Bernardo, Halpern, Aaron, Kaminker, Joshua S, ...
Annotation of an improved whole-genome shotgun assembly of the Drosophila melanogaster genome predicted 297 protein-coding genes and six non-protein-coding genes, including known heterochromatic...
Bergman, Casey M, Pfeiffer, Barret D, Rincón-Limas, Diego E, Hoskins, Roger A, Gnirke, Andreas, Mungall, Chris J, ...
Analysis of conservation in eight genomic regions (apterous, even-skipped, fushi tarazu, twist, and Rhodopsins 1, 2, 3 and 4) from four Drosophila species (D. erecta, D. pseudoobscura, D. willistoni,...
The Bioperl Toolkit: Perl Modules for the Life Sciences
Stajich, Jason E., Block, David, Boulez, Kris, Brenner, Steven E., Chervitz, Stephen A., Dagdigian, Chris, ...
The Bioperl project is an international open-source collaboration of biologists, bioinformaticians, and computer scientists that has evolved over the past 7 yr into the most comprehensive library of...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly
Hoskins, Roger A, Smith, Christopher D, Carlson, Joseph W, Carvalho, A Bernardo, Halpern, Aaron, Kaminker, Joshua S, ...
Annotation of an improved whole-genome shotgun assembly of the Drosophila melanogaster genome predicted 297 protein-coding genes and six non-protein-coding genes, including known heterochromatic...
Bergman, Casey M, Pfeiffer, Barret D, Rincón-Limas, Diego E, Hoskins, Roger A, Gnirke, Andreas, Mungall, Chris J, ...
Analysis of conservation in eight genomic regions (apterous, even-skipped, fushi tarazu, twist, and Rhodopsins 1, 2, 3 and 4) from four Drosophila species (D. erecta, D. pseudoobscura, D. willistoni,...
The Bioperl Toolkit: Perl Modules for the Life Sciences
Stajich, Jason E., Block, David, Boulez, Kris, Brenner, Steven E., Chervitz, Stephen A., Dagdigian, Chris, ...
The Bioperl project is an international open-source collaboration of biologists, bioinformaticians, and computer scientists that has evolved over the past 7 yr into the most comprehensive library of...
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Yandell, Mark, Mungall, Chris J, Smith, Chris, Prochnik, Simon, Kaminker, Joshua, Hartzell, George, ...
We have used the annotations of six animal genomes (Homo sapiens, Mus musculus, Ciona intestinalis, Drosophila melanogaster, Anopheles gambiae, and Caenorhabditis elegans) together with the sequences...